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Species belonging to selected taxon:

Brassica rapa



ABOUT THIS RECORD

ID: MNEST000327
species: Brassica rapa
miRNA family: MIRf1281
source: miRNEST

Taxonomy by NCBI:
Brassica rapa Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGTTTGGTTGCTGAGAAAA

miRNA*
 TTCTCGGTGACCAGATTCCGATA

mismatches: 2
bulges: 2
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pre-miRNA
 ATTATTTCATTTCTGTTTGGTTGCTGAGAAAACGGTGGAAAATTTTCTGAATTTTTCTTTCTCGGTGACCAGATTCCGATATTTTTG

dot-bracket secondary structure
...........((.(((((((((((((((((.....(((((((((...))))))))))))))))))))))))))...))........


SIMILARITIES
miRBase vvi-MIR3629b: 0.001

PMRD ptc-miRf12247-akr: 0.001

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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